MoSeq

MoSeq

The use of video analysis techniques have transformed our understanding of animal behavior. Recently, members of the Datta Lab have developed tools to parse out mouse behavior into sub-second motifs. First, Sherry Lin and colleagues introduced Depth MoSeq, an...
Live Mouse Tracker Toolkit

Live Mouse Tracker Toolkit

Nicolas Torquet, one of the developers of LiveMouseTracker (LMT), has shared the following about the new addition to the video tracking system package: LMT-toolkit, developed for facilitation of LMT-based data analysis: “LMT-toolkit is an open source web...
PyMouseTracks: Adaptable Rodent Tracking System

PyMouseTracks: Adaptable Rodent Tracking System

Tony Fong and colleagues recently published their project, PyMouseTracks (PMT). PMT is an open source, scalable and customizable system for tracking and behavior assessment, available now on GitHub. PyMouseTracks is an open source, adaptable tracking system for...
DANNCE

DANNCE

DANNCE is a direct method for 3D markerless pose estimation and tracking developed by Timothy Dunn, Jesse Marshall, and colleagues in Bence Ölveczky’s lab. It works on recorded video data from multiple cameras. The key innovation in this method is to use geometrical...
LiftPose3D

LiftPose3D

Several methods for tracking behavior in three dimensions have emerged in recent years. Two related packages are DeepFly3D (Gunel et al., 2019) and LiftPose3D (Gosztolai et al., 2021). They were developed by a research group headed by Pavan Ramdya in the...