B-soID: unsupervised behavior analysis

B-soID: unsupervised behavior analysis

Eric Yttri from Carnegie Mellon University has shared the following about B-SOiD, an open source unsupervised algorithm for discovery of spontaneous behaviors: “Capturing the performance of naturalistic behaviors remains a tantalizing but prohibitively difficult field...
Oat: online animal tracker

Oat: online animal tracker

Jonathan Newman of the Wilson Lab at Massachusetts Institute of Technology has developed and shared a set of programs for processing video. The only thing you’ll enjoy more than an oat milk latte from your favorite coffeeshop is the Oat collection of video processing...
LocoWhisk and ART

LocoWhisk and ART

Dr Robyn Grant from Manchester Metropolitan University in Manchester, UK has shared her group’s most recent project called LocoWhisk, which is a hardware and software solution for measuring rodent exploratory, sensory and motor behaviours: In describing the project,...
ezTrack

ezTrack

Zach Pennington from Denise Cai’s lab at Mt. Sinai recently published in Scientific Reports describing their latest open-source project called ezTrack: ezTrack is an open-source, platform independent set of behavior analysis pipelines using interactive Python...
Stytra

Stytra

Vilim Štih has shared their new project from the Portugues lab called Stytra, which was recently published in PLOS Computational Biology (Štih, Petrucco et al., 2019): “Stytra is a flexible open-source software package written in Python and designed to cover all the...